The λmax fell in the range 477–487 nm which corroborates with the range of 480–490 nm published for more limited subsets of carbohydrates [20], [25] and [26]. For hexose sugars (n = 11), the mean λmax = 485 ± 3 nm buy SB431542 and for pentose sugars (n = 2), the mean λmax = 477 ± 1 nm. From this dataset, a fixed value of 485 nm was determined to
provide robust measurement of diverse polysaccharides in the modified PHS assay. Using a wavelength of 485 nm, standard curves were generated for the library of polysaccharides, with the corresponding gradient functions provided in Fig. 3. In the modified PHS assay, hexoses absorb more strongly than pentoses at 485 nm. This order is maintained even if the λmax for pentoses is used for the absorbance measurement. The anionic polysaccharides absorb far less per unit mass than do the neutral carbohydrates. In large part, this is due to the presence of non-signalling anions
such as sulfate. It has been previously shown that for complex oligosaccharides containing different hexoses, the Modulators summed contribution of the reactive hexoses equates to the approximate reactivity of the polysaccharide [25]. Moreover, as N-acetyl galactosamine, N-acetyl glucosamine, and N-acetyl neuraminic acid have been demonstrated to insignificantly react in the PHS assay (data not shown), the contributions of certain structures can be discounted if other reactive pentoses and hexoses are present [26]. Similarly, the organic and inorganic anion groups do not signal and can also be disregarded. After applying these data transformations to oligosaccharides comprised of similar A 1210477 repeating sugar components, the absorbance response converges on a single line as a function of the concentration of particular reactive monosaccharide (Fig. 4). The data in Fig. 4 can be used to approximate the expected reactivity of diverse carbohydrates. Of the carbohydrate classes tested, the hexoses produced the highest absorptivity
in the modified PHS assay. The absorbance of heteropolysaccharides can be approximated by the addition of the reactive components. However, it was noted that addition was imperfect when heteropolysaccharides composed of both glucuronic acid and glucose were summed, as the polysaccharide containing both units reacted slightly less than the sum of the independently Org 27569 generated glucose and glucuronic acid curves. To facilitate appropriate comparisons, the molar absorptivities of the reactive units are displayed in Table 3. The absorptivity values in the modified PHS method are consistent with those described in the original PHS papers by DuBois et al. [20]. The absorptivities measured in the described PHS assay underpinned the spectrum of dynamic linear ranges depicted in Fig. 5. Having an elevated lower limit of quantitation (LOQ) is advantageous when monitoring the array of concentrations across a microplate where the load material titre is 0.5–5 mg/mL.