Cells were washed twice with degassed sample buffer and resuspended in 90 μl of the sample buffer. The cell suspension was then incubated with 10 μl MACS anti-rat IgG MicroBeads (Miltenyi Biotech) at 4° for 15 min. The cell–bead suspension was washed by centrifugation and the cell–bead complex was Crizotinib datasheet resuspended in 500 μl degassed sample buffer. The sample was then applied to a MACS MS+ selection column (Miltenyi Biotech) in the presence of the MiniMACS high-energy permanent magnet (Miltenyi Biotech).
The negative (non-GP2 binding) cells were allowed to flow through the column. The column was washed five times with degassed sample buffer and the fractions were pooled with CAL 101 the negative cells. The magnet was then removed and the positive (GP2 binding) cells were flushed out of the column. Both positive and negative samples were assessed for viability and enrichment using the Countess® Automated Cell Counter (Invitrogen). Cells were then resuspended in Lysis/Binding Buffer and the gene expression of Gp2 and Egr1 was assessed
by qRT-PCR (see Supplementary material, Table S1 for primer sequences). Frozen intestinal sections were cut into 10-μm thick sections, which were fixed with 10% neutral buffered formalin (Sigma) and then permeabilized with 0·2% Triton-X-100 (Sigma). The plant lectin Ulex europaeus agglutinin 1 (UEA-1) was used to stain M cells. UEA-1-FITC (Vector Laboratories Ltd, Peterborough, UK) was added to cells at a concentration of 10 μg/ml. Cells were then counterstained with 0·165 μm DAPI (Molecular Probes). Cells were mounted with ProLong® Gold anti-fade reagent using No. 1·5 coverslips. Slides were viewed with an Olympus FV1000 confocal laser scanning microscope (Olympus, Hamburg, Germany). THP-1 monocytes
(monocytic leukaemia cell line; ATCC, TIB 202) maintained in RPMI-1640 (Gibco) supplemented with 10% FBS, 100 μg/ml penicillin, 100 U/ml streptomycin and 0·05 mm 2-mercaptoethanol (Gibco) were seeded in six-well tissue culture dishes (Sarstedt, Nümbrecht, Ixazomib in vitro Germany) at a concentration of 1 × 106 cells/ml. Bacteria were cultured overnight, washed twice by centrifugation (3200 g for 10 min), and resuspended in PBS at a final concentration of 1 × 109 colony-forming units/ml. Bacteria (1 ml) were labelled with 10 μm carboxyfluorescein diacetate succinimidyl ester (CFSE, CellTrace™ Cell Proliferation Kit; Molecular Probes) for 15 min. Bacteria were then biotinylated using No-Weigh™N-hydroxysulphosuccinimide (Sulfo-NHS)-Biotin (Pierce, Thermo Scientific, Rockford, IL) according to the manufacturer’s instructions. The CFSE-labelled-biotinylated bacteria were added to the THP-1 cells at a multiplicity of infection of 10 : 1 and THP-1 cells and bacteria were co-incubated for 16 hr at 37° with 5% CO2.